Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930428.1_cds_XP_016477446.1_69177
CDS Infomation

[gene=LOC107798932] [db_xref=GeneID:107798932] [protein=pentatricopeptide repeat-containing protein At2g15980-like] [protein_id=XP_016477446.1] [location=complement(10300..11775)] [gbkey=CDS]
Sequence

ATGGCGATGCTATCAACTATTGCAAGACGCACTATTTTCTCAACCCCATTAACCAAACAC
GCATCTTCCTCTTCCTTCTCTTCTCCTACTTCCTCTTCTCCAACTCAATCGTCTTCAAAC
GAAGATGAAACTCTAGTCTCAACAGCCATAACAATCCTCAAACACCATCGCTCAAAATCA
AGATGGTCTGAAATTCTTTCCCTATCCCCACCCCCTTCCGGCTTCACTCCCACCCAAGTC
TCTCAAATCATTCTTCAACTCCGCAACACACCTCATCTTGCCCTCCGTTTCTTTCATTTC
ACAATCACTCGCTCCATTTGCTCTCACTCTCTTTCTTCCTACGCCACTATCATTCACATC
CTCTCCCGATCCCGCCTTAAATCCCAAGCTTTAGAGCTACTAAAATCCGCCATTCGTAAA
TTCCCTGAAATCCATCAACCTGATTTAACAAACCCACCAAGGATTTTCCAAATCTTGGTT
AAAACTTACAGGACTTGTGATTCAGCTCCCTTTGTGTTTGATTTGTTGATTAAAGCTTAT
TTAGATTCTAAAAAAATTGATCTTTCTGTTCAACTTGTGAGGATTTTAGCTAAAAAGAAT
ATCTTTCCACATGTTGTTATATGCAATTCTTTGATTGAGTTGATTGCGAAAAGTCGAGGC
CCTTTTGGTGCTTATGATATGTATCGGGAAATCTTTAAAGGTAGAGTGGTGAAGGGTGTG
ATCGCGAATGCTTATACGTTTAACATTCTTATGGTTGCTTTTCATAGAGAAGGAGTTGTG
GAGAAGGTTGAGGAGGTTTGGAAGGAAATGATGGAAAAAAATTGCGCCCCTAATACATAT
AGTTATAGCGTTTTAATGGCTGCGTATTGTGAGGATGGAAGGATTGAAAATGCCATGAAA
GTTTGGGAGGAGATGGGTGATAAGGGCGTGAAACATGATATTGTAGCTTATAATACCATA
ATTGGGGGGTTTTGTAAAGTTGGGGAGGTTGAGAGAGCTGAGGAGATGTACACGGAGATG
GTTTTCAATGGGGTGGAGTGTACTTGTGTTACACTTGAGCATCTCACAAATGGACATTGT
ATGAGCGGGAATGCTGAAGCAGCTCTGGTCTTGTATAAGGATATGTGTCGAAAGGGATTC
AAGCCAGAAAGTTCAATGATAGATGCAATTGCTCAGGTGCTCTGTGACAAAAGTGGAGTT
CTTGAAGCCTTGGAATTTGTGAGAGGTGTAATAAAGAAACATGATATCGTACCAAGGAAG
ACAACATACGAACTTCTGATACGGAGCTTGTGTGAGGAGGGGTGGATGGAAGAAGCTCGG
AAACTTCAGGTGGAGATGGTGGGGAAAGGATTTGCACCAAATTTGGAAATATATAGTGCT
TTCATTGACGGGTACATCAAGCAAGGGGATGATAAAATGGCTGAAAGTTTGAGGAATGAA
ATGCTTACGAATAAGATCCCTTGTAAAGATAGCTAG

Peptide Sequence

PEP ID

XP_016477446.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Nicotiana tabacum]
Sequence

MAMLSTIARRTIFSTPLTKHASSSSFSSPTSSSPTQSSSNEDETLVSTAITILKHHRSKS
RWSEILSLSPPPSGFTPTQVSQIILQLRNTPHLALRFFHFTITRSICSHSLSSYATIIHI
LSRSRLKSQALELLKSAIRKFPEIHQPDLTNPPRIFQILVKTYRTCDSAPFVFDLLIKAY
LDSKKIDLSVQLVRILAKKNIFPHVVICNSLIELIAKSRGPFGAYDMYREIFKGRVVKGV
IANAYTFNILMVAFHREGVVEKVEEVWKEMMEKNCAPNTYSYSVLMAAYCEDGRIENAMK
VWEEMGDKGVKHDIVAYNTIIGGFCKVGEVERAEEMYTEMVFNGVECTCVTLEHLTNGHC
MSGNAEAALVLYKDMCRKGFKPESSMIDAIAQVLCDKSGVLEALEFVRGVIKKHDIVPRK
TTYELLIRSLCEEGWMEEARKLQVEMVGKGFAPNLEIYSAFIDGYIKQGDDKMAESLRNE
MLTNKIPCKDS

Transcript Sequence

Gene sequence data has not been registered.